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cloudgene github-install

Installs an application from a GitHub repo to your local repository.

This command is deprecated. Please use cloudgene install user/repo


cloudgene github-install <owner>/<repository>[/<subdir>]


Parameter Required Description
<repository> yes The GitHub repository of the application


Install application from GitHub repository lukfor/hello-cloudgene:

cloudgene github-install lukfor/hello-cloudgene

Install application from a subdirectory in GitHub repository genepi/cloudgene-examples:

cloudgene github-install genepi/cloudgene-examples/fastqc

Install a certain version (tag or release):

cloudgene github-install lukfor/hello-cloudgene@v1.2.0