Starts the Cloudgene web-application which provides an user-interface to submit jobs for all installed workflows.
cloudgene server [--host <hadoop_cluster_ip>] [--user <hadoop_username>] [--docker] [--image <docker_image>] [--port]
||no||Execute all Hadoop steps on this Hadoop JobTracker (default: use localhost as JobTracker).|
||no||Execute Hadoop steps on behalf of this username (default: cloudgene)|
||no||Path to Hadoop configuration folder (e.g. /etc/hadoop/conf))|
||no||Start the web-application on this port (default: 8082)|
Start server without Hadoop support¶
Start server on the Namenode of a Hadoop Cluster¶
Cloudgene uses the default configuration of your Hadoop Cluster. If it is installed on the Hadoop Namenode you can run it without additional flags:
Start server and connect it with a remote Hadoop Cluster¶
cloudgene server --host <remote-ip>
Cloudgene executes your MapReduce steps on the remote cluster. You can use the
--user flag to set the username which should be used to execute your Hadoop jobs (e.g. it uses the HDFS directory of this user for all files).